STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08376.1Propionate catabolism operon regulatory protein PrpR. (577 aa)    
Predicted Functional Partners:
AIS08382.1
4-hydroxythreonine-4-phosphate dehydrogenase.
 
  
 0.876
AIS08377.1
Hypothetical protein.
 
     0.860
AIS08378.1
Hypothetical protein.
 
     0.780
AIS08379.1
Hypothetical protein.
 
     0.741
AIS08380.1
Alcohol dehydrogenase.
 
   
 0.693
AIS08667.1
RNA polymerase sigma-54 factor RpoN.
 
  
 0.685
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
     
 0.665
AIS08381.1
4-hydroxy-tetrahydrodipicolinate synthase.
 
   
 0.599
AIS08576.1
Fructose response regulator of fruA and EII fructose/mannose.
  
 
 0.506
AIS09981.1
Transcriptional regulator, luxR family, associated with agmatine catabolism.
  
 
 0.506
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.