STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08397.1ABC transporter, ATP-binding protein. (298 aa)    
Predicted Functional Partners:
AIS08398.1
ABC-type Na+ efflux pump, permease component.
  
 0.981
AIS09705.1
ABC transporter, ATP-binding protein.
  
 
0.913
AIS09633.1
ATPase component of general energizing module of ECF transporters.
     
0.899
AIS08536.1
ABC transporter, ATP-binding protein.
     
0.816
AIS08819.1
Glutamate transport ATP-binding protein.
     
0.800
AIS09482.1
Glutamate transport ATP-binding protein.
    
0.745
AIS09632.1
ATPase component of general energizing module of ECF transporters.
    
0.613
AIS08684.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC.
     
0.587
AIS09742.1
Deoxyguanosinetriphosphate triphosphohydrolase.
   
    0.489
AIS08396.1
PTS system, N-acetylglucosamine-specific IIA component.
       0.443
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.