STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08423.13-hydroxybutyryl-CoA dehydratase. (264 aa)    
Predicted Functional Partners:
AIS08888.1
3-ketoacyl-CoA thiolase.
 0.999
AIS08425.1
MaoC family protein.
  
 0.980
AIS09628.1
SSU ribosomal protein S9p (S16e).
  
 0.957
AIS09385.1
SSU ribosomal protein S16p.
   
  0.949
AIS09145.1
SSU ribosomal protein S15p (S13e).
    
 0.938
AIS09644.1
SSU ribosomal protein S5p (S2e).
   
 0.938
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.933
AIS09457.1
LSU ribosomal protein L33p / LSU ribosomal protein L33p, zinc-dependent.
   
 
 0.890
AIS09369.1
SSU ribosomal protein S2p (SAe).
   
 0.887
AIS09664.1
SSU ribosomal protein S7p (S5e).
  
 0.881
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.