STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08431.12-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase. (273 aa)    
Predicted Functional Partners:
AIS09280.1
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
  
 0.994
AIS09284.1
[Citrate [pro-3S]-lyase] ligase.
 
 0.986
AIS09283.1
Citrate lyase gamma chain, acyl carrier protein.
 
  
 0.953
AIS09282.1
Citrate lyase beta chain.
 
  
 0.936
AIS09281.1
Citrate lyase alpha chain.
 
  
 0.928
AIS08432.1
Transcriptional regulator, LysR family.
       0.662
AIS09285.1
Halo peroxidase.
 
     0.549
AIS09279.1
Citrate lyase transcriptional regulator CitI.
 
     0.402
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.