STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08457.1Zn-dependent hydrolase (beta-lactamase superfamily). (265 aa)    
Predicted Functional Partners:
AIS08456.1
SA_21-like protein.
  
  
 0.916
AIS08455.1
YycH protein.
  
  
 0.915
AIS08454.1
Two-component sensor kinase SA14-24.
  
  
 0.883
AIS08453.1
Two-component response regulator SA14-24.
  
  
 0.853
AIS08458.1
Serine protease, DegP/HtrA, do-like.
  
  
 0.761
AIS09025.1
DNA-binding response regulator, OmpR family.
  
  
 0.585
AIS08774.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.553
AIS09489.1
DNA polymerase I.
     
 0.416
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.