STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08475.1ATPase, AAA family. (440 aa)    
Predicted Functional Partners:
AIS09967.1
Macro domain, possibly ADP-ribose binding module.
      0.702
AIS08325.1
DNA polymerase III beta subunit.
   
 0.572
AIS08474.1
Putative surface protein.
       0.518
AIS08335.1
Replicative DNA helicase.
     
 0.486
AIS08918.1
Cell division protein FtsK.
 
  
 0.472
AIS08782.1
Putative NagD-like phosphatase.
 
      0.460
AIS09569.1
DNA polymerase III subunits gamma and tau.
  
 0.449
AIS08941.1
Phosphoglucosamine mutase.
   
   0.437
AIS08980.1
Phosphoglucosamine mutase.
   
   0.437
AIS09489.1
DNA polymerase I.
  
  
 0.431
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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