STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08509.1Transporter. (371 aa)    
Predicted Functional Partners:
AIS08510.1
Integral membrane protein.
 
    0.965
AIS08511.1
Lipase/esterase.
       0.782
AIS08508.1
Transcriptional regulator.
 
     0.602
AIS08779.1
Hypothetical protein.
 
     0.541
AIS09234.1
Hypothetical protein.
  
     0.491
AIS08507.1
D-alanine--D-alanine ligase.
       0.476
AIS08460.1
Energy-coupling factor transport system permease protein; Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine.
  
     0.461
AIS08512.1
Hypothetical protein.
       0.448
AIS09869.1
Major facilitator superfamily permease.
  
     0.433
AIS08523.1
Putative aggregation promoting protein.
 
     0.416
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.