STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08598.1Chromosome (plasmid) partitioning protein ParB. (282 aa)    
Predicted Functional Partners:
AIS08599.1
Chromosome (plasmid) partitioning protein ParA.
 
 0.994
AIS08600.1
Chromosome (plasmid) partitioning protein ParB.
 
  
0.949
AIS08597.1
rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB.
  
  
 0.929
AIS08601.1
Hypothetical protein.
       0.803
AIS08602.1
GTP-binding and nucleic acid-binding protein YchF.
 
    0.765
AIS08603.1
Integral membrane protein.
       0.743
AIS08918.1
Cell division protein FtsK.
 
  
 0.724
AIS09110.1
Cell division protein FtsQ.
  
  
 0.632
AIS08596.1
Hypothetical protein.
  
    0.551
AIS08837.1
ATP-dependent DNA helicase UvrD/PcrA.
  
  
 0.549
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.