STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08609.1Osmosensitive K+ channel histidine kinase KdpD. (388 aa)    
Predicted Functional Partners:
AIS08608.1
DNA-binding response regulator, OmpR family.
 
 0.990
AIS08453.1
Two-component response regulator SA14-24.
 
 0.938
AIS09468.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.938
AIS09025.1
DNA-binding response regulator, OmpR family.
 
 0.913
AIS08610.1
UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase.
  
  
 0.747
AIS09971.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
 
  
 0.728
AIS08611.1
Aspartate racemase.
       0.639
AIS08429.1
Substrate-specific component PanT of predicted pantothenate ECF transporter.
  
     0.530
AIS08455.1
YycH protein.
 
  
 0.529
AIS08456.1
SA_21-like protein.
 
  
 0.487
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.