STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08630.1D-3-phosphoglycerate dehydrogenase. (333 aa)    
Predicted Functional Partners:
AIS08800.1
Uridine kinase.
   
 0.952
AIS09602.1
Phosphoglycerate mutase.
  
 0.916
AIS09848.1
Phosphoglycerate mutase.
  
 0.916
AIS08632.1
L-xylulose/3-keto-L-gulonate kinase.
  
 0.799
AIS08631.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 0.777
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.768
AIS08629.1
PTS system, galactitol-specific IIC component.
       0.702
AIS09646.1
LSU ribosomal protein L6p (L9e).
   
   0.676
AIS09654.1
LSU ribosomal protein L16p (L10e).
  
   0.664
AIS09656.1
LSU ribosomal protein L22p (L17e).
   
 
 0.660
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.