STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08683.1DNA-entry nuclease (Competence-specific nuclease). (291 aa)    
Predicted Functional Partners:
AIS09786.1
Methylated-DNA--protein-cysteine methyltransferase.
  
  
 0.605
AIS09142.1
Late competence protein ComEC, DNA transport.
 
   
 0.603
AIS08534.1
Galactose-1-phosphate uridylyltransferase.
  
     0.573
AIS08681.1
Hypothetical protein.
 
     0.570
AIS09255.1
RNA polymerase sigma factor RpoD.
    
   0.555
AIS08926.1
RecA protein.
  
  
 0.519
AIS08682.1
DNA polymerase III polC-type.
       0.516
AIS08680.1
Putative membrane protein yetF.
       0.491
AIS08455.1
YycH protein.
  
     0.481
AIS08679.1
Hypothetical protein.
       0.479
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.