STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08688.1Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein. (434 aa)    
Predicted Functional Partners:
AIS08684.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC.
 
 0.998
AIS08685.1
N-Acetyl-D-glucosamine ABC transport system, permease protein 1.
 
 0.998
AIS08686.1
Glycerol-3-phosphate ABC transporter, permease protein UgpE.
 0.998
AIS08689.1
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
 
  
 
0.940
AIS08687.1
Hypothetical protein.
 
     0.918
AIS08508.1
Transcriptional regulator.
  
     0.463
AIS09024.1
Putative integral membrane protein.
  
     0.449
AIS09459.1
N-acetylglucosamine kinase of eukaryotic type.
 
    0.433
AIS08778.1
Glycerophosphoryl diester phosphodiesterase.
 
  
 0.415
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.