STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08692.1Transcriptional regulator, TetR family. (195 aa)    
Predicted Functional Partners:
AIS08693.1
Membrane protein, MmpL family.
 
  
 0.856
AIS08691.1
Beta-lactamase class A.
 
   
 0.768
AIS08695.1
Hypothetical protein.
 
     0.722
AIS09767.1
Hypothetical protein.
  
     0.607
AIS08883.1
Teichoic acid glycosylation protein.
 
  
 0.596
AIS09875.1
Hypothetical protein.
  
     0.572
AIS09100.1
Rod shape-determining protein MreD.
  
     0.564
AIS09147.1
Hypothetical protein.
  
     0.560
AIS08502.1
Transcriptional regulator, TetR family.
  
     0.559
AIS09773.1
Hypothetical protein.
  
     0.549
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.