STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08720.1Integrase. (410 aa)    
Predicted Functional Partners:
AIS08716.1
FtsK/SpoIIIE family.
 
   
 0.863
AIS09956.1
Chitinase.
 
     0.649
AIS08719.1
Hypothetical protein.
       0.609
AIS08718.1
Putative replication initiator protein.
       0.607
AIS09238.1
Hypothetical protein.
  
     0.571
AIS09958.1
Chitinase.
 
   
 0.559
AIS09242.1
Hypothetical protein.
  
     0.558
AIS09241.1
Hypothetical protein.
  
     0.540
AIS09957.1
Chitinase.
 
   
 0.537
AIS09911.1
ABC transporter ATPase and permease components.
 
     0.535
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.