STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08754.1Aromatic amino acid aminotransferase gamma. (393 aa)    
Predicted Functional Partners:
AIS10018.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
  
 
 0.921
AIS10017.1
N-acetyl-L,L-diaminopimelate deacetylase.
  
 
 0.914
AIS09270.1
N-acetyl-L,L-diaminopimelate aminotransferase.
  
  
 
0.907
AIS10014.1
Aspartate aminotransferase.
  
  
 
0.906
AIS08803.1
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 0.580
AIS08753.1
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.543
AIS10019.1
Diaminopimelate decarboxylase.
  
  
 0.536
AIS08630.1
D-3-phosphoglycerate dehydrogenase.
 
 
 0.534
AIS08798.1
Deblocking aminopeptidase.
 
   0.534
AIS09009.1
Glutathione-regulated potassium-efflux system ancillary protein KefG.
  
    0.516
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.