STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08785.1Thioredoxin reductase. (268 aa)    
Predicted Functional Partners:
AIS08784.1
DedA protein.
       0.823
AIS08768.1
Thioredoxin.
  
 
 0.794
AIS09492.1
Thioredoxin.
  
 0.705
AIS09930.1
Sulfur carrier protein adenylyltransferase ThiF.
  
  
 0.609
AIS09461.1
Phenylalanyl-tRNA synthetase beta chain.
  
 
 0.552
AIS09450.1
Glutamine synthetase type I.
   
 
 0.516
AIS09149.1
Cell division trigger factor.
  
  
 0.468
AIS09594.1
Glutamyl-tRNA synthetase.
 
 
 0.458
AIS09765.1
Methionyl-tRNA synthetase.
  
 
 0.453
AIS08696.1
Succinate-semialdehyde dehydrogenase [NAD].
  
  
 0.446
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.