STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08989.1ABC transporter, ATP-binding protein. (325 aa)    
Predicted Functional Partners:
AIS08990.1
Hypothetical protein.
 
  
 0.976
AIS08991.1
Conserved membrane protein, multidrug efflux associated.
 
  
 0.962
AIS08536.1
ABC transporter, ATP-binding protein.
  
0.911
AIS09819.1
Cell division transporter, ATP-binding protein FtsE.
 
     
0.900
AIS08401.1
Daunorubicin resistance transmembrane protein.
 
  
 0.899
AIS09691.1
ABC transporter ATPase component.
 
     
0.881
AIS08402.1
ABC-type uncharacterized transport system, permease component.
 
  
 0.839
AIS09632.1
ATPase component of general energizing module of ECF transporters.
 
     
0.614
AIS08819.1
Glutamate transport ATP-binding protein.
 
     
0.545
AIS08992.1
Hypothetical protein.
       0.518
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.