STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09003.1Hypothetical protein YebC. (242 aa)    
Predicted Functional Partners:
AIS09273.1
Aspartyl-tRNA synthetase.
 
  
 0.847
AIS09791.1
Tyrosyl-tRNA synthetase.
 
 
 0.811
AIS09536.1
Holliday junction DNA helicase RuvA.
  
 0.766
AIS09765.1
Methionyl-tRNA synthetase.
  
 
 0.736
AIS09382.1
LSU ribosomal protein L19p.
  
   0.732
AIS09174.1
SSU ribosomal protein S1p.
  
  
 0.627
AIS08602.1
GTP-binding and nucleic acid-binding protein YchF.
  
  
 0.578
AIS09149.1
Cell division trigger factor.
  
  
 0.578
AIS09159.1
LSU ribosomal protein L32p.
  
  
 0.571
AIS09368.1
Translation elongation factor Ts.
  
  
 0.560
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.