STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09028.1Lipoteichoic acid synthase LtaS Type IIb. (730 aa)    
Predicted Functional Partners:
AIS08790.1
Lipoteichoic acid synthase LtaS Type IIa.
  
 
 
0.911
AIS09177.1
TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase.
 
    0.697
AIS09017.1
Adenine-specific methyltransferase.
  
     0.693
AIS09182.1
Hypothetical protein.
  
     0.662
AIS09027.1
Putative stomatin/prohibitin-family membrane protease subunit YbbK.
  
    0.653
AIS09029.1
Glycopeptide antibiotics resistance protein.
       0.583
AIS09081.1
Universal stress protein family.
 
    0.582
AIS08770.1
Hypothetical protein.
 
     0.570
AIS09110.1
Cell division protein FtsQ.
  
  
 0.551
AIS08843.1
Diacylglycerol kinase.
 
   
 0.550
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.