STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09057.1Ribulose-phosphate 3-epimerase. (215 aa)    
Predicted Functional Partners:
AIS09978.1
Transketolase, N-terminal section.
 
 0.989
AIS10081.1
6-phosphogluconate dehydrogenase, decarboxylating.
   
 0.956
AIS08811.1
Ribose 5-phosphate isomerase A.
 
 0.953
AIS09979.1
Transketolase, C-terminal section.
 
 
 0.953
AIS09716.1
Transketolase.
 
 0.943
AIS10042.1
Transketolase.
 
 0.943
AIS09411.1
Ribulose-phosphate 3-epimerase.
  
  
 
0.912
AIS10010.1
2-dehydro-3-deoxygluconate kinase.
  
 0.895
AIS08960.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
 
 0.817
AIS09058.1
6-phospho-3-hexuloisomerase.
  
  
 0.814
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.