STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09074.1ATP synthase beta chain. (479 aa)    
Predicted Functional Partners:
AIS09068.1
ATP synthase F0 sector subunit a.
 
 0.999
AIS09069.1
ATP synthase F0 sector subunit c.
  
 0.999
AIS09070.1
ATP synthase F0 sector subunit b.
 
 0.999
AIS09071.1
ATP synthase delta chain.
 
 0.999
AIS09072.1
ATP synthase alpha chain.
 
0.999
AIS09073.1
ATP synthase gamma chain.
 0.999
AIS09075.1
ATP synthase epsilon chain.
 
 0.999
AIS09331.1
Cation-transporting ATPase.
  
 0.919
AIS09090.1
SSU ribosomal protein S4p (S9e).
  
  
 0.911
AIS09196.1
Manganese-dependent inorganic pyrophosphatase.
    
 0.911
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.