STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09077.1Rod shape-determining protein MreB. (329 aa)    
Predicted Functional Partners:
AIS09099.1
Rod shape-determining protein MreC.
 
 
 0.923
AIS09080.1
Rod shape-determining protein RodA.
 
 
 0.918
AIS09078.1
Protein YidD.
  
    0.903
AIS08920.1
Transcriptional regulator in cluster with unspecified monosaccharide ABC transport system.
 
 
 0.878
AIS09112.1
Cell division protein FtsZ.
  
 
 0.751
AIS09079.1
Hypothetical protein.
       0.743
AIS09149.1
Cell division trigger factor.
  
   0.671
AIS09458.1
Penicillin-binding protein 2B.
 
 
 0.648
AIS09111.1
Cell division protein FtsA.
  
 
 0.605
AIS09148.1
Translation elongation factor Tu.
   
 
 0.592
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.