STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09078.1Protein YidD. (97 aa)    
Predicted Functional Partners:
AIS09077.1
Rod shape-determining protein MreB.
  
    0.903
AIS10086.1
Ribonuclease P protein component.
  
  
 0.879
AIS09080.1
Rod shape-determining protein RodA.
       0.796
AIS09079.1
Hypothetical protein.
       0.784
AIS09466.1
Inner membrane protein translocase component YidC, OxaA protein.
  
  
 0.691
AIS10085.1
Inner membrane protein translocase component YidC, short form OxaI-like.
  
  
 0.676
AIS08700.1
Seryl-tRNA synthetase.
  
    0.645
AIS09138.1
Ribosomal RNA small subunit methyltransferase D.
  
  
 0.635
AIS09586.1
Preprotein translocase subunit SecE.
   
    0.627
AIS10087.1
LSU ribosomal protein L34p.
  
  
 0.587
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.