STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09096.1Hydrolase, haloacid dehalogenase-like family. (226 aa)    
Predicted Functional Partners:
AIS09094.1
Valyl-tRNA synthetase.
 
     0.816
AIS09095.1
Dihydrofolate synthase.
  
    0.795
AIS09097.1
DNA repair protein RadC.
       0.681
AIS09098.1
Rod shape-determining protein MreB.
       0.490
AIS09093.1
tRNA S(4)U 4-thiouridine synthase (former ThiI).
       0.440
AIS09092.1
Cysteine desulfurase.
       0.417
AIS09099.1
Rod shape-determining protein MreC.
       0.416
AIS08372.1
PTS system, trehalose-specific IIB component.
  
  
 0.408
AIS08655.1
PTS system, sucrose-specific IIB component.
  
  
 0.408
AIS09390.1
PTS system, beta-glucoside-specific IIB component.
  
  
 0.408
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.