STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09104.1rRNA small subunit methyltransferase H. (315 aa)    
Predicted Functional Partners:
AIS09103.1
Cell division protein MraZ.
  
 0.993
AIS09105.1
Cell division protein FtsL.
  
  
 0.947
AIS09106.1
Cell division protein FtsI [Peptidoglycan synthetase].
 
  
 0.928
AIS09108.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.889
AIS09109.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
 
  
 0.883
AIS09107.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
  
 0.872
AIS09111.1
Cell division protein FtsA.
  
  
 0.863
AIS09110.1
Cell division protein FtsQ.
  
  
 0.849
AIS09113.1
FtsZ-interacting protein related to cell division.
  
  
 0.781
AIS09112.1
Cell division protein FtsZ.
   
 0.776
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.