STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09107.1Phospho-N-acetylmuramoyl-pentapeptide- transferase. (320 aa)    
Predicted Functional Partners:
AIS09109.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
 
 
 0.997
AIS09688.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase.
 
 0.992
AIS09108.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
  
 0.988
AIS09106.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 0.965
AIS09518.1
Hypothetical protein.
    
 0.912
AIS09490.1
UDP-N-acetylmuramate--alanine ligase.
 
  
 0.905
AIS09110.1
Cell division protein FtsQ.
  
  
 0.897
AIS09104.1
rRNA small subunit methyltransferase H.
 
  
 0.872
AIS09136.1
Cell division protein FtsW.
 
  
 0.868
AIS09105.1
Cell division protein FtsL.
  
  
 0.852
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.