STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09141.1Late competence protein ComEA, DNA receptor. (238 aa)    
Predicted Functional Partners:
AIS09142.1
Late competence protein ComEC, DNA transport.
 
  
 0.937
AIS09139.1
Phosphopantetheine adenylyltransferase.
      0.894
AIS09140.1
Lon-like protease with PDZ domain.
      0.862
AIS09010.1
Late competence protein ComGA, access of DNA to ComEA.
 
  
 0.772
AIS09011.1
Late competence protein ComGB, access of DNA to ComEA.
 
  
 0.770
AIS09136.1
Cell division protein FtsW.
  
  
 0.756
AIS08930.1
ComF operon protein A, DNA transporter ATPase.
   
  
 0.744
AIS09137.1
Putative Cytosolic Protein.
       0.704
AIS09138.1
Ribosomal RNA small subunit methyltransferase D.
       0.704
AIS09666.1
Leader peptidase (Prepilin peptidase).
  
  
 0.690
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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