STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09147.1Hypothetical protein. (274 aa)    
Predicted Functional Partners:
AIS09146.1
Ribonuclease J2 (endoribonuclease in RNA processing).
       0.788
AIS08502.1
Transcriptional regulator, TetR family.
  
     0.774
AIS08691.1
Beta-lactamase class A.
  
     0.774
AIS08695.1
Hypothetical protein.
  
     0.774
AIS09100.1
Rod shape-determining protein MreD.
  
     0.774
AIS09601.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
     0.773
AIS08468.1
Hypothetical protein.
  
     0.771
AIS09725.1
Hypothetical protein.
  
     0.771
AIS09815.1
Hypothetical protein.
  
     0.771
AIS08596.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.