STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09172.1Endopeptidase lytF precursor. (163 aa)    
Predicted Functional Partners:
AIS08691.1
Beta-lactamase class A.
 
   
 0.778
AIS08695.1
Hypothetical protein.
  
     0.773
AIS09197.1
Hypothetical protein.
  
   
 0.772
AIS09147.1
Hypothetical protein.
  
     0.759
AIS08455.1
YycH protein.
  
   
 0.750
AIS09767.1
Hypothetical protein.
 
     0.746
AIS09233.1
Hypothetical protein.
  
     0.744
AIS09015.1
Late competence protein ComGE.
  
     0.733
AIS09795.1
LacX protein, plasmid.
 
    0.729
AIS09238.1
Hypothetical protein.
  
     0.728
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.