STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09180.1Putative membrane protein hemolysin III. (221 aa)    
Predicted Functional Partners:
AIS10065.1
Glucosamine-6-phosphate deaminase.
     
 0.616
AIS09182.1
Hypothetical protein.
       0.609
AIS09181.1
Hypothetical protein DUF194, DegV family.
       0.578
AIS09184.1
Ribonuclease HII.
  
    0.540
AIS09183.1
50S ribosomal subunit maturation GTPase RbgA.
       0.534
AIS08661.1
PTS system, mannose-specific IID component.
  
    0.529
AIS09186.1
DNA topoisomerase I.
  
  
 0.521
AIS09489.1
DNA polymerase I.
     
 0.518
AIS09185.1
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
     
 0.461
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.