STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09184.1Ribonuclease HII. (251 aa)    
Predicted Functional Partners:
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.972
AIS09183.1
50S ribosomal subunit maturation GTPase RbgA.
  
  
 0.916
AIS08325.1
DNA polymerase III beta subunit.
  
 
 0.880
AIS09489.1
DNA polymerase I.
  
 
 0.833
AIS08497.1
Ribonuclease HI.
  
 
 0.790
AIS09182.1
Hypothetical protein.
       0.766
AIS09185.1
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
  
    0.745
AIS09186.1
DNA topoisomerase I.
 
 
 0.740
AIS08941.1
Phosphoglucosamine mutase.
    
 0.727
AIS09181.1
Hypothetical protein DUF194, DegV family.
  
    0.721
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.