STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09263.1Transamidase GatB domain protein. (147 aa)    
Predicted Functional Partners:
AIS09264.1
SSU ribosomal protein S21p.
  
  
 0.935
AIS09260.1
GTP-binding protein Era.
  
    0.793
AIS09262.1
Phosphate starvation-inducible protein PhoH, predicted ATPase.
     
 0.785
AIS09259.1
DNA recombination and repair protein RecO.
       0.782
AIS09261.1
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly.
       0.782
AIS09145.1
SSU ribosomal protein S15p (S13e).
  
    0.564
AIS09433.1
LSU ribosomal protein L21p.
  
    0.515
AIS09689.1
LSU ribosomal protein L31p / LSU ribosomal protein L31p, zinc-independent.
  
    0.509
AIS09159.1
LSU ribosomal protein L32p.
  
    0.503
AIS09382.1
LSU ribosomal protein L19p.
  
    0.484
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.