STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09276.1GTP pyrophosphokinaseppGpp synthetase I. (746 aa)    
Predicted Functional Partners:
AIS08909.1
GTP pyrophosphokinase.
    
 0.927
AIS09164.1
Pyruvate kinase.
  
 
 0.921
AIS09419.1
Guanylate kinase.
  
 
 0.921
AIS09805.1
Guanylate kinase.
  
 
 0.921
AIS09275.1
D-tyrosyl-tRNA(Tyr) deacylase.
  
    0.913
AIS09646.1
LSU ribosomal protein L6p (L9e).
    
 
 0.909
AIS08412.1
Ribonucleotide reductase of class II (coenzyme B12-dependent).
     
 0.906
AIS09145.1
SSU ribosomal protein S15p (S13e).
   
   0.897
AIS09642.1
LSU ribosomal protein L15p (L27Ae).
   
 
 0.896
AIS09648.1
SSU ribosomal protein S14p (S29e) / SSU ribosomal protein S14p (S29e), zinc-dependent.
    
 
 0.896
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
Server load: low (14%) [HD]