STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09296.1L-asparaginase. (302 aa)    
Predicted Functional Partners:
AIS09295.1
Cytoplasmic copper homeostasis protein cutC.
 
     0.724
AIS08779.1
Hypothetical protein.
   
    0.530
AIS08529.1
Transcriptional regulator, RpiR family.
  
    0.516
AIS08565.1
Sialic acid utilization regulator, RpiR family.
  
    0.516
AIS08656.1
Transcriptional regulator, RpiR family.
  
    0.516
AIS09202.1
Transcriptional regulator, RpiR family.
  
    0.516
AIS09694.1
Sialic acid utilization regulator, RpiR family.
  
    0.516
AIS09402.1
Oligopeptide transport ATP-binding protein OppF.
 
  
 0.498
AIS09298.1
Hypothetical protein.
  
    0.496
AIS09299.1
Fumarate reductase flavoprotein subunit.
       0.493
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.