STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09349.1tRNA pseudouridine synthase B. (297 aa)    
Predicted Functional Partners:
AIS09352.1
Ribosomal protein L7Ae family protein.
  
 0.996
AIS09351.1
Translation initiation factor 2.
 
 0.993
AIS09348.1
Riboflavin kinase.
 
  
 0.992
AIS09350.1
Ribosome-binding factor A.
 
  
 0.970
AIS09354.1
Transcription termination protein NusA.
  
    0.903
AIS09710.1
GMP synthase [glutamine-hydrolyzing].
  
  
 0.879
AIS09174.1
SSU ribosomal protein S1p.
  
 0.874
AIS09183.1
50S ribosomal subunit maturation GTPase RbgA.
  
 0.870
AIS09474.1
GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit.
  
 0.870
AIS09355.1
Ribosome maturation protein RimP.
  
  
 0.869
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.