STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09386.1Signal recognition particle, subunit Ffh SRP54. (475 aa)    
Predicted Functional Partners:
AIS09393.1
Signal recognition particle receptor protein FtsY (alpha subunit).
 
0.997
AIS09586.1
Preprotein translocase subunit SecE.
  
 0.986
AIS09641.1
Preprotein translocase secY subunit.
   
 0.975
AIS08791.1
Preprotein translocase subunit SecG.
   
 0.970
AIS08933.1
Protein export cytoplasm protein SecA ATPase RNA helicase.
    
 0.962
AIS09385.1
SSU ribosomal protein S16p.
 
 
 0.960
AIS09387.1
Signal recognition particle associated protein.
  
  
 0.957
AIS10085.1
Inner membrane protein translocase component YidC, short form OxaI-like.
  
 0.956
AIS09466.1
Inner membrane protein translocase component YidC, OxaA protein.
  
 0.954
AIS09660.1
LSU ribosomal protein L4p (L1e).
  
 0.939
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.