STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09452.1tRNA dimethylallyltransferase. (306 aa)    
Predicted Functional Partners:
AIS09451.1
Aluminum resistance protein.
  
    0.909
AIS09801.1
GTP-binding protein HflX.
  
  
 0.696
AIS09537.1
DNA mismatch repair protein MutL.
 
  
 0.692
AIS09453.1
Rhodanese-like domain protein.
  
  
 0.687
AIS08753.1
Glycerophosphoryl diester phosphodiesterase.
 
    0.684
AIS09461.1
Phenylalanyl-tRNA synthetase beta chain.
 
  
 0.677
AIS08841.1
Aspartyl-tRNA(Asn) amidotransferase subunit A.
    
 0.665
AIS09261.1
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly.
  
  
 0.663
AIS09256.1
DNA primase.
 
  
 0.659
AIS09104.1
rRNA small subunit methyltransferase H.
 
 
 0.651
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.