STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09456.15-formyltetrahydrofolate cyclo-ligase. (191 aa)    
Predicted Functional Partners:
AIS09427.1
Methylenetetrahydrofolate dehydrogenase (NADP+).
 
  
 0.942
AIS09455.1
GlpG protein (membrane protein of glp regulon).
  
    0.933
AIS09457.1
LSU ribosomal protein L33p / LSU ribosomal protein L33p, zinc-dependent.
       0.719
AIS09454.1
Hypothetical protein.
       0.675
AIS09458.1
Penicillin-binding protein 2B.
  
  
 0.626
AIS09453.1
Rhodanese-like domain protein.
  
    0.613
AIS09258.1
Glycyl-tRNA synthetase alpha chain.
   
    0.505
AIS09461.1
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.500
AIS09508.1
Hydrolase of the alpha/beta superfamily.
  
    0.489
AIS09160.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase.
  
    0.483
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.