STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09463.1Transcriptional regulator, HxlR family. (116 aa)    
Predicted Functional Partners:
AIS09464.1
rRNA methylase.
       0.683
AIS10033.1
Putative oxidoreductase.
  
  
 0.577
AIS09462.1
Phenylalanyl-tRNA synthetase alpha chain.
       0.571
AIS09461.1
Phenylalanyl-tRNA synthetase beta chain.
       0.568
AIS09941.1
Programmed cell death toxin MazF.
   
    0.537
AIS10006.1
Hypothetical protein.
   
    0.537
AIS09465.1
Putative nucleoside phosphatase.
       0.505
AIS10021.1
Diaminopimelate epimerase.
   
    0.480
AIS09466.1
Inner membrane protein translocase component YidC, OxaA protein.
       0.449
AIS09017.1
Adenine-specific methyltransferase.
   
    0.445
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.