STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09466.1Inner membrane protein translocase component YidC, OxaA protein. (319 aa)    
Predicted Functional Partners:
AIS09641.1
Preprotein translocase secY subunit.
  
 0.984
AIS08791.1
Preprotein translocase subunit SecG.
 
 0.982
AIS09586.1
Preprotein translocase subunit SecE.
  
 0.975
AIS08933.1
Protein export cytoplasm protein SecA ATPase RNA helicase.
  
 
 0.954
AIS09386.1
Signal recognition particle, subunit Ffh SRP54.
  
 0.954
AIS09534.1
Preprotein translocase subunit YajC.
 
 
 0.942
AIS09393.1
Signal recognition particle receptor protein FtsY (alpha subunit).
  
 
 0.935
AIS10085.1
Inner membrane protein translocase component YidC, short form OxaI-like.
  
  
0.927
AIS09069.1
ATP synthase F0 sector subunit c.
  
 
 0.780
AIS09465.1
Putative nucleoside phosphatase.
  
    0.773
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.