STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09471.1Ribosomal silencing factor RsfA (former Iojap). (115 aa)    
Predicted Functional Partners:
AIS09474.1
GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit.
  
 
 0.973
AIS09476.1
LSU ribosomal protein L20p.
   
 
 0.954
AIS09473.1
Nicotinate-nucleotide adenylyltransferase.
  
  
 0.948
AIS09651.1
LSU ribosomal protein L14p (L23e).
    
 
 0.936
AIS09472.1
Hydrolase (HAD superfamily), YqeK.
  
    0.934
AIS09650.1
LSU ribosomal protein L24p (L26e).
   
 
 0.932
AIS09433.1
LSU ribosomal protein L21p.
  
   0.925
AIS09634.1
LSU ribosomal protein L17p.
  
   0.919
AIS09382.1
LSU ribosomal protein L19p.
  
 
 0.917
AIS09629.1
LSU ribosomal protein L13p (L13Ae).
  
   0.916
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.