STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09476.1LSU ribosomal protein L20p. (118 aa)    
Predicted Functional Partners:
AIS09477.1
LSU ribosomal protein L35p.
  
 
 0.997
AIS09478.1
Translation initiation factor 3.
  
 0.996
AIS08334.1
LSU ribosomal protein L9p.
  
 
 0.994
AIS09369.1
SSU ribosomal protein S2p (SAe).
  
 
 0.994
AIS09583.1
LSU ribosomal protein L1p (L10Ae).
 
 
 0.994
AIS09629.1
LSU ribosomal protein L13p (L13Ae).
 
 
 0.994
AIS09432.1
LSU ribosomal protein L27p.
 
 
 0.992
AIS09628.1
SSU ribosomal protein S9p (S16e).
 
 
 0.992
AIS08332.1
SSU ribosomal protein S18p / SSU ribosomal protein S18p, zinc-independent.
 
 
 0.991
AIS09656.1
LSU ribosomal protein L22p (L17e).
  
 
 0.991
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.