STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09654.1LSU ribosomal protein L16p (L10e). (146 aa)    
Predicted Functional Partners:
AIS09644.1
SSU ribosomal protein S5p (S2e).
 
 0.999
AIS09646.1
LSU ribosomal protein L6p (L9e).
 
 0.999
AIS09647.1
SSU ribosomal protein S8p (S15Ae).
 
 0.999
AIS09649.1
LSU ribosomal protein L5p (L11e).
 
 0.999
AIS09651.1
LSU ribosomal protein L14p (L23e).
 0.999
AIS09652.1
SSU ribosomal protein S17p (S11e).
 
 0.999
AIS09655.1
SSU ribosomal protein S3p (S3e).
 0.999
AIS09656.1
LSU ribosomal protein L22p (L17e).
 
 0.999
AIS09657.1
SSU ribosomal protein S19p (S15e).
 
 0.999
AIS09658.1
LSU ribosomal protein L2p (L8e).
 0.999
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.