STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09667.1DNA-directed RNA polymerase beta' subunit. (1219 aa)    
Predicted Functional Partners:
AIS09635.1
DNA-directed RNA polymerase alpha subunit.
 
 0.999
AIS09668.1
DNA-directed RNA polymerase beta subunit.
 0.999
AIS09418.1
DNA-directed RNA polymerase omega subunit.
  
 0.996
AIS09584.1
LSU ribosomal protein L11p (L12e).
 
 0.981
AIS09354.1
Transcription termination protein NusA.
 
 0.977
AIS09369.1
SSU ribosomal protein S2p (SAe).
 0.972
AIS09655.1
SSU ribosomal protein S3p (S3e).
 
 
 0.969
AIS09664.1
SSU ribosomal protein S7p (S5e).
 
 
 0.968
AIS09644.1
SSU ribosomal protein S5p (S2e).
 
 
 0.967
AIS09576.1
LSU ribosomal protein L10p (P0).
 
 
 0.964
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.