STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09671.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
AIS10030.1
Ribosomal-protein-alanine acetyltransferase.
 
     0.670
AIS09513.1
NAD(P)HX dehydratase.
  
    0.556
AIS09421.1
Acetyltransferase, GNAT family.
 
     0.536
AIS08970.1
ABC transporter-related protein.
  
     0.533
AIS09112.1
Cell division protein FtsZ.
   
    0.531
AIS09951.1
Sortase A, LPXTG specific.
  
     0.516
AIS09790.1
Nudix hydrolase family protein.
  
     0.483
AIS08841.1
Aspartyl-tRNA(Asn) amidotransferase subunit A.
   
    0.482
AIS09354.1
Transcription termination protein NusA.
   
    0.482
AIS09386.1
Signal recognition particle, subunit Ffh SRP54.
  
    0.482
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.