STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09687.1DEAD-box ATP-dependent RNA helicase CshA. (494 aa)    
Predicted Functional Partners:
AIS09660.1
LSU ribosomal protein L4p (L1e).
  
 0.840
AIS09661.1
LSU ribosomal protein L3p (L3e).
   
 
 0.839
AIS09688.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase.
  
    0.837
AIS09655.1
SSU ribosomal protein S3p (S3e).
   
 0.830
AIS09352.1
Ribosomal protein L7Ae family protein.
   
 0.818
AIS09663.1
Translation elongation factor G.
  
 0.817
AIS09576.1
LSU ribosomal protein L10p (P0).
  
 0.807
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 0.776
AIS09183.1
50S ribosomal subunit maturation GTPase RbgA.
  
 0.768
AIS09474.1
GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit.
  
 0.768
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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