STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09739.1Biotin operon repressor / Biotin-protein ligase. (254 aa)    
Predicted Functional Partners:
AIS09729.1
Biotin carboxylase of acetyl-CoA carboxylase.
 
  
 0.979
AIS09731.1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase.
   
 
 0.929
AIS09570.1
tRNA-specific adenosine-34 deaminase.
  
  
 0.872
AIS09558.1
TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA.
  
    0.857
AIS08417.1
Exodeoxyribonuclease III.
  
    0.816
AIS09179.1
tRNA nucleotidyltransferase.
  
  
 0.795
AIS08977.1
UDP-N-acetylenolpyruvoylglucosamine reductase.
  
  
 0.789
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
  
 0.757
AIS09734.1
Malonyl CoA-acyl carrier protein transacylase.
 
   
 0.754
AIS10015.1
4-hydroxy-tetrahydrodipicolinate reductase.
  
  
 0.739
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.