STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09847.1Translation elongation factor LepA. (604 aa)    
Predicted Functional Partners:
AIS09846.1
Transcriptional regulator, TetR family.
 
 
 0.955
AIS09629.1
LSU ribosomal protein L13p (L13Ae).
 
 
 0.808
AIS09658.1
LSU ribosomal protein L2p (L8e).
    
 
 0.777
AIS09583.1
LSU ribosomal protein L1p (L10Ae).
   
 
 0.773
AIS09159.1
LSU ribosomal protein L32p.
  
 
 0.765
AIS09369.1
SSU ribosomal protein S2p (SAe).
  
 
 0.762
AIS09090.1
SSU ribosomal protein S4p (S9e).
   
 
 0.761
AIS09145.1
SSU ribosomal protein S15p (S13e).
  
 
 0.760
AIS09476.1
LSU ribosomal protein L20p.
  
 
 0.760
AIS08330.1
SSU ribosomal protein S6p.
  
 
 0.759
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.