STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09871.1Transcriptional regulator, LysR family. (278 aa)    
Predicted Functional Partners:
AIS09841.1
Transcriptional regulator, LysR family.
  
     0.694
AIS09945.1
Transcriptional regulator, LysR family.
  
     0.660
AIS08403.1
Transcriptional regulator.
  
     0.596
AIS08432.1
Transcriptional regulator, LysR family.
  
     0.595
AIS09870.1
Fumarate reductase flavoprotein subunit.
  
    0.590
AIS09195.1
Transcriptional regulator, LysR family.
  
     0.536
AIS08427.1
Transcriptional regulator, LysR family.
  
     0.451
AIS09301.1
Malolactic regulator.
  
     0.406
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.