STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS09946.1Transporter, putative. (363 aa)    
Predicted Functional Partners:
AIS09947.1
Fumarate reductase flavoprotein subunit.
 
     0.841
AIS09956.1
Chitinase.
 
     0.774
AIS08542.1
ABC-type antimicrobial peptide transport system, permease component.
 
     0.765
AIS09957.1
Chitinase.
 
     0.764
AIS09958.1
Chitinase.
 
     0.752
AIS08716.1
FtsK/SpoIIIE family.
  
    0.749
AIS09592.1
YefM protein (antitoxin to YoeB).
 
     0.723
AIS09739.1
Biotin operon repressor / Biotin-protein ligase.
  
     0.710
AIS09085.1
N-acetylmuramidase.
  
     0.635
AIS08585.1
UPF0246 protein YaaA.
  
    0.627
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.